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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917782.1_cds_XP_016467332.1_60089
CDS Infomation

[gene=LOC107789965] [db_xref=GeneID:107789965] [protein=RNA pseudouridine synthase 7-like isoform X3] [protein_id=XP_016467332.1] [location=complement(join(15069..15171,15996..16234,16700..16831,18231..18287,18409..18474,19817..19899,20030..20108,21830..21917,22126..22226,22594..22671,22813..22856,22958..23048))] [gbkey=CDS]
Sequence

ATGAACATGAAAAGGAAGCGAGGGGATATGGAGATAGTGTGGCAAACTCCCGCCAACCCA
CCGGAACGCCATGACTACATCTTCCGCAATGGAATACGCTATGTCAGACCTTACTACTTC
GAATTCATTTCTCATGTGAAGAACCGGTGGGCTGGGAAGACAATTGTTGATCTCTTCTCT
GAAGAATTTAAAGGGAGACCTCGTGATTACTATGAATCCGCTGTTAAATCTGGACGTATA
CAAGTTGATGGACAAAAGGTGCATCTTTCATATGTAGTGCAGTCATCACAAAAGATTAGC
CATTTCTTGCACAGGCATGAACCACCAGTGATGTCGTGGGATGTCGAAATACTATGTGAA
GAACCAGACGTGCTGACAGTGTGCAAGCCTGCATCTGTTCCAGTTCATCCATGTGGACAA
TACCGCAAGAATACGGTCGTTGGTATACTACAAGCTGAGTATGGCTTGGCACCTTTGTTT
CCGGTTCATCGCCTAGATCGCTTAGTCTCAGGACTACTTATCTTGGCTAGAAGTGCTTCT
AGGGCTGACCTCTTCAGGCAACAGATAGAATCAGGAGCAGTGCAGAAACAGTATATTGCG
AGAGTGATCGGAGTGTTCCCTGACAAGCAGCAAGTTGTGAATGCTAATGTCAATTACAAT
GCCCGAGAAGGGAGAAGCACAGTTGAGGTGGGGGATGACCAGGGAAATAGTACTGCTTCA
CTGAAGGGAAAGACTGCATGTACCAAATTTACAAGGATTAGTACCAACGAGAAGCACAGC
ATTGTTTTGTGCGAACCCGTCACCGGCAGGACACATCAGATACGTGTGCATCTGCAATAT
ACAGGTCATCCTATAGCCAATGATATGCTCTACCTGTCTGAACTCGTGTCTAGTCGTTCT
GCTGAAGGATCGAGTGCGGATAGAGCTGCAGCTAAATCATGTTCTCCTCCAGAGCCCATC
TCTCTTGAAAATGGCATTAGTGACACGGCAAATGACTCCAATGAAGATTTCAGCATTGAT
CCTATGTGTACAAATTGTCCAAATCTTGCTCCGAAAGGGTATGAGGGAAATGAAGAGGGT
CTATGGCTGCATTGTGTAAAATATTCAGGACCTGACTGGATATATGAATGTCCACTTCCA
GATTGGGCATCCCTAAGTTGA

Peptide Sequence

PEP ID

XP_016467332.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 7-like isoform X3 [Nicotiana tabacum]
Sequence

MNMKRKRGDMEIVWQTPANPPERHDYIFRNGIRYVRPYYFEFISHVKNRWAGKTIVDLFS
EEFKGRPRDYYESAVKSGRIQVDGQKVHLSYVVQSSQKISHFLHRHEPPVMSWDVEILCE
EPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSAS
RADLFRQQIESGAVQKQYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDDQGNSTAS
LKGKTACTKFTRISTNEKHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSELVSSRS
AEGSSADRAAAKSCSPPEPISLENGISDTANDSNEDFSIDPMCTNCPNLAPKGYEGNEEG
LWLHCVKYSGPDWIYECPLPDWASLS

Transcript Sequence

Gene sequence data has not been registered.